Download the Tutorial Data Set

We have prepared a small toy data set for this tutorial. You can download the data set using the following command:

~/eccb18tutorial/pipeline/download_input_files.sh

This will create a folder named eccb18tutorial/input with the following content:

File	Content
genomes/	Directory containing the reference genomes
read1.fq.gz	Read 1 of paired reads (gzipped FASTQ)
read2.fq.gz	Read 2 of paired reads (gzipped FASTQ)